Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX422845: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293521' containing sample 'Staphylococcus aureus F76996'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5M spots, 1G bases, 506.9Mb downloads

UUID: a032aa1f-abe8-4ee0-a1fc-60efac80d4f2

Design: Illumina sequencing of Staphylococcus aureus F76996 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224465 • SRP035039 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F76996

SAMN02383754 • SRS526895 • All experiments • All runs

Organism: Staphylococcus aureus F76996

Library:

Name: Pond-293521

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433203.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J8P

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50652

research_project: RP-509

root_sample_id: SM-4T4LD

sample_id: SM-53J8P

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5M spots, 1G bases, 506.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103451	2,544,127	513.9M	257.4Mb	2014-01-07
SRR1103457	2,467,577	498.5M	249.4Mb	2014-01-07

ID:: 598319

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