Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX392078: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-295541' containing sample 'Staphylococcus aureus F19383'
1 ILLUMINA (Illumina HiSeq 2000) run: 4.4M spots, 881M bases, 439.5Mb downloads

UUID: d63b8869-7568-4139-a9e5-ae46d3734e13

Design: Illumina sequencing of Staphylococcus aureus F19383 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224590 • SRP034169 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F19383

SAMN02384056 • SRS515271 • All experiments • All runs

Organism: Staphylococcus aureus F19383

Library:

Name: Pond-295541

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 435389.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:543LB

material_type: DNA:DNA Somatic

product_order: PDO-2359

product_part_number: P-WG-0004

project: G51006

research_project: RP-509

root_sample_id: SM-4T3DY

sample_id: SM-543LB

work_request: 38945

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-02 16:38:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 4.4M spots, 881M bases, 439.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1049979	4,361,223	881M	439.5Mb	2013-12-15

ID:: 562925

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