Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX546103: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316173' containing sample '84069-2'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.8M spots, 570.2M bases, 257.1Mb downloads

UUID: 7063ae44-b2f7-45ba-8df4-f1d8cca197ef

Design: Illumina sequencing of Staphylococcus aureus 84069-2 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus 84069-2

SAMN02391224 • SRS613169 • All experiments • All runs

Organism: Staphylococcus aureus 84069-2

Library:

Name: Pond-316173

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 464904.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BIWS

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51913

research_project: RP-513

root_sample_id: SM-4Q873

sample_id: SM-5BIWS

work_request: 39113

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.8M spots, 570.2M bases, 257.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1290880	2,822,644	570.2M	257.1Mb	2014-05-17

ID:: 781323

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