Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX555604: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315219' containing sample '1111200013'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.2M spots, 645.8M bases, 306.4Mb downloads

UUID: dfa3c7fb-9fef-4ef8-9ab9-896547d7f5b1

Design: Illumina sequencing of Staphylococcus aureus 1111200013 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226387 • SRP042400 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus 1111200013

SAMN02391261 • SRS622694 • All experiments • All runs

Organism: Staphylococcus aureus 1111200013

Library:

Name: Pond-315219

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445730.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571VJ

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51783

research_project: RP-513

root_sample_id: SM-4Q7EJ

sample_id: SM-571VJ

work_request: 39112

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.2M spots, 645.8M bases, 306.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1302897	3,197,037	645.8M	306.4Mb	2014-05-29

ID:: 794614

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