Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX463598: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316270' containing sample 'Staphylococcus aureus F89062'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.2M spots, 1.1G bases, 531.6Mb downloads

UUID: 49dc0468-97e3-4ffb-81f1-3ea546497808

Design: Illumina sequencing of Staphylococcus aureus F89062 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA226901 • SRP036517 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F89062

SAMN02398841 • SRS552292 • All experiments • All runs

Organism: Staphylococcus aureus F89062

Library:

Name: Pond-316270

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 463550.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BC91

material_type: DNA:DNA Somatic

product_order: PDO-2426

product_part_number: P-WG-0004

project: G52153

research_project: RP-509

root_sample_id: SM-4T65E

sample_id: SM-5BC91

work_request: 39164

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.2M spots, 1.1G bases, 531.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1159799	2,623,782	530M	266.6Mb	2014-02-04
SRR1162979	2,607,161	526.6M	265Mb	2014-02-06

ID:: 643766

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity