Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX462940: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316301' containing sample 'Staphylococcus aureus F92073'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6M spots, 1.2G bases, 584.9Mb downloads

UUID: 178eff62-f74b-41d1-88dd-ea8d2dfae7f2

Design: Illumina sequencing of Staphylococcus aureus F92073 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA226906 • SRP036266 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F92073

SAMN02398846 • SRS551723 • All experiments • All runs

Organism: Staphylococcus aureus F92073

Library:

Name: Pond-316301

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 463581.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BC9W

material_type: DNA:DNA Somatic

product_order: PDO-2426

product_part_number: P-WG-0004

project: G52160

research_project: RP-509

root_sample_id: SM-4T65L

sample_id: SM-5BC9W

work_request: 39164

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6M spots, 1.2G bases, 584.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1158972	3,010,419	608.1M	293.4Mb	2014-02-04
SRR1163165	2,988,988	603.8M	291.6Mb	2014-02-06

ID:: 643108

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