Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX479766: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322241' containing sample 'Staphylococcus aureus T16619'
1 ILLUMINA (Illumina HiSeq 2000) run: 6M spots, 1.2G bases, 627Mb downloads

UUID: 5d001d34-711d-4a61-bccc-a6a2c087e7df

Design: Illumina sequencing of Staphylococcus aureus T16619 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227520 • SRP039209 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus T16619

SAMN02402397 • SRS565048 • All experiments • All runs

Organism: Staphylococcus aureus T16619

Library:

Name: Pond-322241

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485470.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G6FP

material_type: DNA:DNA Somatic

product_order: PDO-2502

product_part_number: P-WG-0004

project: G53881

research_project: RP-509

root_sample_id: SM-4T1HX

sample_id: SM-5G6FP

work_request: 39226

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 6M spots, 1.2G bases, 627Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180585	6,006,842	1.2G	627Mb	2014-03-01

ID:: 669200

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