Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX467795: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315499' containing sample 'Staphylococcus aureus F48611'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.2M spots, 1.3G bases, 660.4Mb downloads

UUID: d9721305-6e89-45f9-bad5-68035534b58b

Design: Illumina sequencing of Staphylococcus aureus F48611 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227674 • SRP037034 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F48611

SAMN02402598 • SRS555385 • All experiments • All runs

Organism: Staphylococcus aureus F48611

Library:

Name: Pond-315499

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462642.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASRW

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G53955

research_project: RP-509

root_sample_id: SM-4T1JJ

sample_id: SM-5ASRW

work_request: 39228

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 02:47:49.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.2M spots, 1.3G bases, 660.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165370	3,074,278	621M	329Mb	2014-02-09
SRR1167076	3,114,485	629.1M	331.4Mb	2014-02-11

ID:: 647983

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity