Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX467854: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315532' containing sample 'Staphylococcus aureus T59813'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.8M spots, 1.2G bases, 608.1Mb downloads

UUID: 3bef19a1-266f-4088-8449-b2aa9dacb547

Design: Illumina sequencing of Staphylococcus aureus T59813 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227711 • SRP037074 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus T59813

SAMN02402635 • SRS555425 • All experiments • All runs

Organism: Staphylococcus aureus T59813

Library:

Name: Pond-315532

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462675.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASSU

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G53949

research_project: RP-509

root_sample_id: SM-4T1JD

sample_id: SM-5ASSU

work_request: 39228

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 02:47:49.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.8M spots, 1.2G bases, 608.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165438	2,873,111	580.4M	302.6Mb	2014-02-09
SRR1167153	2,917,320	589.3M	305.6Mb	2014-02-11

ID:: 648042

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity