Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX548076: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318426' containing sample 'VET0465R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 489Mb downloads

UUID: 83ec27b3-5b5e-4377-8095-b6d19bd7796c

Design: Illumina sequencing of Staphylococcus aureus VET0465R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0465R

SAMN02404260 • SRS616333 • All experiments • All runs

Organism: Staphylococcus aureus VET0465R

Library:

Name: Pond-318426

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470155.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8W7

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55197

research_project: RP-513

root_sample_id: SM-4PO7N

sample_id: SM-5C8W7

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 489Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293502	2,566,414	518.4M	244Mb	2014-05-21
SRR1293508	2,581,987	521.6M	245.1Mb	2014-05-21

ID:: 785034

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