Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX555874: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319954' containing sample 'VET0481R'
1 ILLUMINA (Illumina HiSeq 2000) run: 5M spots, 1G bases, 469.9Mb downloads

UUID: 3366cc87-243a-4adb-8ede-dcc5296211b0

Design: Illumina sequencing of Staphylococcus aureus VET0481R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228779 • SRP042566 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0481R

SAMN02404269 • SRS622956 • All experiments • All runs

Organism: Staphylococcus aureus VET0481R

Library:

Name: Pond-319954

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 473544.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CVK3

material_type: DNA:DNA Somatic

product_order: PDO-2556

product_part_number: P-WG-0004

project: G54983

research_project: RP-513

root_sample_id: SM-4PO7W

sample_id: SM-5CVK3

work_request: 39345

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 5M spots, 1G bases, 469.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303571	4,959,072	1G	469.9Mb	2014-05-30

ID:: 794902

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity