Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX567672: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319748' containing sample 'VET1859R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5M spots, 1G bases, 466.9Mb downloads

UUID: c811249c-0bb2-4270-8a05-25318c1deac8

Design: Illumina sequencing of Staphylococcus aureus VET1859R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228807 • SRP042876 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1859R

SAMN02404297 • SRS626969 • All experiments • All runs

Organism: Staphylococcus aureus VET1859R

Library:

Name: Pond-319748

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470802.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDGR

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55223

research_project: RP-513

root_sample_id: SM-4PO8P

sample_id: SM-5CDGR

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5M spots, 1G bases, 466.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1329850	2,479,565	500.9M	231.5Mb	2014-06-03
SRR1330263	2,527,142	510.5M	235.4Mb	2014-06-04

ID:: 810489

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