Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX565729: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319806' containing sample 'VET1035S'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 874.1M bases, 396.9Mb downloads

UUID: 134111b2-ddfb-48dd-89c7-5797c158cc2d

Design: Illumina sequencing of Staphylococcus aureus VET1035S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228865 • SRP042657 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1035S

SAMN02404355 • SRS626232 • All experiments • All runs

Organism: Staphylococcus aureus VET1035S

Library:

Name: Pond-319806

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470860.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDIF

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55271

research_project: RP-513

root_sample_id: SM-4Q54Q

sample_id: SM-5CDIF

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 874.1M bases, 396.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326315	2,141,950	432.7M	196.7Mb	2014-06-03
SRR1346402	2,185,427	441.5M	200.1Mb	2014-06-06

ID:: 808546

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