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SRX5063195: Whole genome shotgun sequencing of FSIS11809136 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 456,484 spots, 136.5M bases, 74.9Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Enterococcus
PRJNA292669 • SRP095353 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN10482730 • SRS4079069 • All experiments • All runs
Organism: Enterococcus faecium
Library:
Name: FSIS11809136 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11809136.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 456,484 spots, 136.5M bases, 74.9Mb
Run# of Spots# of BasesSizePublished
SRR8245131456,484136.5M74.9Mb2018-11-27

ID:
6832836

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