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SRX5126413: Whole genome shotgun sequencing of FSIS11816226 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.6M spots, 751.2M bases, 409.3Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Enterococcus
PRJNA292669 • SRP095353 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN10579141 • SRS4139534 • All experiments • All runs
Organism: Enterococcus faecium
Library:
Name: FSIS11816226 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11816226.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 1.6M spots, 751.2M bases, 409.3Mb
Run# of Spots# of BasesSizePublished
SRR83130571,589,259751.2M409.3Mb2018-12-13

ID:
6940400

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