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ERX3163305: HiSeq X Ten paired end sequencing
1 ILLUMINA (HiSeq X Ten) run: 2.2M spots, 671.1M bases, 241.2Mb downloads

Design: Illumina sequencing of library DN503045O:H11, constructed from sample accession ERS1983662 for study accession ERP104779. This is part of an Illumina multiplexed sequencing run (24880_5). This submission includes reads tagged with the sequence GATAGAGG.
Submitted by: Wellcome Sanger Institute
Study: Shigella_evolution_in_India
show Abstracthide Abstract
While a lot of progress has been made in understanding global Shigella evolution and spread, little epidemiological data has been available from India. We are collaborating with the Christian Medical College to understand the evolution and AMR in Shigella infections in Southern India. We envisage using whole genome sequencing and compare the data with the global framework that Sanger Institute already has. The collection, a mix of S. flexneri, S. sonnei and S. dysenteriae, spans more than 20 years and is particularly interesting because it comes from a relatively better developed part of India.
Sample: AM7154236
SAMEA104358684 • ERS1983662 • All experiments • All runs
Library:
Name: DN503045O:H11
Instrument: HiSeq X Ten
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Standard
Runs: 1 run, 2.2M spots, 671.1M bases, 241.2Mb
Run# of Spots# of BasesSizePublished
ERR31340742,222,344671.1M241.2Mb2019-02-08

ID:
7242939

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