U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

ERX2995049: Illumina HiSeq 4000 sequencing
1 ILLUMINA (Illumina HiSeq 4000) run: 13.3M spots, 1.7G bases, 843.9Mb downloads

Submitted by: ETH Zurich,
Study: Analysis of the genes transcriptionally regulated in the course of the general stress response in Sphingomonas melonis Fr1
show Abstracthide Abstract
We analyzed the transcriptomes of different general stress response key regulator knockout mutants after stress exposure and compared them to the wild-type strain. Thereby we aimed to identify the regulon of the alternative sigma factor EcfG and to find out how the regulators PhyR, SdrG and the seven GSR-activating histidine kinases (Paks) influence transcription. The RNA for transcriptome analyses was prepared from the respective Sphingomonas melonis Fr1 cultures in mid-exponential phase. The cultures were split and were either treated with the appropriate stress stimuli or were left untreated. The cells were harvested 1 h after the beginning of the treatment.
Sample: PakA-G KO treated with stress mix replicate 2
SAMEA5165356 • ERS2973077 • All experiments • All runs
Library:
Name: unspecified
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Inverse rRNA
Layout: SINGLE
Runs: 1 run, 13.3M spots, 1.7G bases, 843.9Mb
Run# of Spots# of BasesSizePublished
ERR299264013,287,3331.7G843.9Mb2019-07-04

ID:
8483071

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...