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SRX6409780: Whole genome shotgun sequencing of FSIS11922300 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 860,078 spots, 255.5M bases, 139.7Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Enterococcus
PRJNA292669 • SRP095353 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN12221214 • SRS5067161 • All experiments • All runs
Organism: Enterococcus faecalis
Library:
Name: FSIS11922300 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11922300.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 860,078 spots, 255.5M bases, 139.7Mb
Run# of Spots# of BasesSizePublished
SRR9648221860,078255.5M139.7Mb2019-07-05

ID:
8488535

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