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SRX6429355: Whole genome shotgun sequencing of FSIS11922551 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1M spots, 274.7M bases, 159.6Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Enterococcus
PRJNA292669 • SRP095353 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN12251381 • SRS5084570 • All experiments • All runs
Organism: Enterococcus faecium
Library:
Name: FSIS11922551 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11922551.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 1M spots, 274.7M bases, 159.6Mb
Run# of Spots# of BasesSizePublished
SRR96688641,001,040274.7M159.6Mb2019-07-10

ID:
8518945

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