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SRX6614369: Whole genome Illumina NextSeq sequence of Staphylococcus aureus
1 ILLUMINA (NextSeq 500) run: 1.8M spots, 538.9M bases, 231.5Mb downloads

External Id: EXT00365045
Design: NextSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN12414146 • SRS5187367 • All experiments • All runs
Organism: Staphylococcus aureus
Library:
Name: Nextera XT library SEQ000094847
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward251  reverse

Runs: 1 run, 1.8M spots, 538.9M bases, 231.5Mb
Run# of Spots# of BasesSizePublished
SRR98605591,835,117538.9M231.5Mb2019-07-31

ID:
8724960

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