Whole genome Illumina NextSeq sequence of Campylobacter jejuni - SRA

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SRX6743204: Whole genome Illumina NextSeq sequence of Campylobacter jejuni
1 ILLUMINA (NextSeq 500) run: 3M spots, 871.3M bases, 399.6Mb downloads

External Id: EXT00367024

Design: NextSeq deep shotgun sequencing of cultured isolate.

Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)

Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA

PRJNA278886 • SRP056445 • All experiments • All runs

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The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.

Sample:

SAMN12610218 • SRS5286001 • All experiments • All runs

Organism: Campylobacter jejuni

Library:

Name: Nextera XT library SEQ000078110

Instrument: NextSeq 500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward251 reverse

Runs: 1 run, 3M spots, 871.3M bases, 399.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR10004487	2,970,664	871.3M	399.6Mb	2019-08-20

ID:: 8882935

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Sequence Read Archive

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