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SRX7046252: WGS of Pseudomonas aeruginosa UM1046
1 ILLUMINA (NextSeq 500) run: 938,702 spots, 261M bases, 119Mb downloads

Design: DNA extracted using Qiagen DNeasy UltraClean Microbial Kit. Illumina NextSeq 500 flow cell.
Submitted by: Loyola University Chicago
Study: Female Urinary Microbiota Genome Sequencing
show Abstracthide Abstract
Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed 'no growth' by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Sample: catheter
SAMN13091963 • SRS5564420 • All experiments • All runs
Library:
Name: Pa1046
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 938,702 spots, 261M bases, 119Mb
Run# of Spots# of BasesSizePublished
SRR10336114938,702261M119Mb2019-10-30

ID:
9264869

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