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SRX8019069: WGS: Lactobacillus crispatus UMB1163
1 ILLUMINA (NextSeq 550) run: 1.8M spots, 462.1M bases, 184.6Mb downloads

Design: DNA was extracted using the Qiagen DNeasy Blood & Tissue Kit and quantified using the Qubit Fluorometer. DNA was sent to the Microbial Genomic Sequencing Center (MiGS) at the University of Pittsburgh for sequencing.
Submitted by: Loyola University Chicago
Study: Female Urinary Microbiota Genome Sequencing
show Abstracthide Abstract
Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed 'no growth' by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Sample:
SAMN14478482 • SRS6392406 • All experiments • All runs
Library:
Name: Lc_UMB1163
Instrument: NextSeq 550
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.8M spots, 462.1M bases, 184.6Mb
Run# of Spots# of BasesSizePublished
SRR114410171,781,766462.1M184.6Mb2020-03-28

ID:
10455740

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