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SRX10160983: RNAseq of Pecten maximus:C37
1 ILLUMINA (Illumina HiSeq 2000) run: 24.8M spots, 5G bases, 2.8Gb downloads

Design: RNAseq
Submitted by: Sistemas Genomicos
Study: Pecten maximus (King scallop)
show Abstracthide Abstract
The king scallop (Pecten maximus) is an important fisheries and aquaculture resource. Some diatom species of the genus Pseudo-nitzschia produce domoic acid (DA), a toxin that can cause Amnesic Shellfish Poisoning (ASP) in humans. During the harmful algae blooms the bivalves accumulate the toxins in their tissues. In many bivalves, including the king scallop (P. maximus), the digestive gland is the main organ of accumulation of domoic acid. A group of scallops were subjected to injections of domoic acid in filtered seawater , whereas the other animals (control group) were injected with the same volume of filtered seawater. Six injections were made into the adductor muscle of each scallop in alternate days. A transcriptomic approach (RNA-seq) was used to identify the genes differentially expressed in the digestive gland of the king scallop P. maximus after the injection of domoic acid.
Sample:
SAMN18043531 • SRS8312736 • All experiments • All runs
Organism: Pecten maximus
Library:
Name: Pecten maximus_Sample_C37_PE
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: METATRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 24.8M spots, 5G bases, 2.8Gb
Run# of Spots# of BasesSizePublished
SRR1377533024,797,1325G2.8Gb2022-10-01

ID:
13288559

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