U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX11616648: short-read of Vibrio fischeri ES114
1 ILLUMINA (Illumina MiSeq) run: 2.1M spots, 306.7M bases, 115.9Mb downloads

Design: Colonies were struck out on LBS plates from frozen glycerol stocks. Overnight cultures were grown in LBS medium at 28C, then genomic DNA was extracted using Qiagen Blood and Tissue Kit. DNA was sent to SEA-PHAGES at University of Pittsburgh, where it was quantified by Quibit, prepped with NEBs Ultra II FS Kit, run on Bioanalyzer, and run on Illumina Miseq qith v3 kit.
Submitted by: University of Hawaii-Manoa
Study: Phage resistant Vibrio fischeri sequences
PRJNA751213 • SRP330677 • All experiments • All runs
show Abstracthide Abstract
From manuscript "Independent host- and bacterium-based determinants protect a model symbiosis from phage predation." Short read sequencing of wildtype V. fischeri ES114, as well as four phage resistant isolates derived from ES114.
Sample: parental strain
SAMN20511715 • SRS9651947 • All experiments • All runs
Organism: Aliivibrio fischeri ES114
Library:
Name: Vf_WT
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 2.1M spots, 306.7M bases, 115.9Mb
Run# of Spots# of BasesSizePublished
SRR153120422,133,392306.7M115.9Mb2021-10-31

ID:
15531265

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...