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SRX12488193: Whole genome Illumina MiSeq sequence of Shigella flexneri
1 ILLUMINA (Illumina MiSeq) run: 901,907 spots, 431.7M bases, 225.9Mb downloads

External Id: EXT00420013
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN22061004 • SRS10451414 • All experiments • All runs
Organism: Shigella flexneri
Library:
Name: DNA Prep library SEQ000114308
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward251  reverse

Runs: 1 run, 901,907 spots, 431.7M bases, 225.9Mb
Run# of Spots# of BasesSizePublished
SRR16203839901,907431.7M225.9Mb2021-10-05

ID:
16930762

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