Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX359235: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-271567' containing sample 'Staphylococcus aureus M0126'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 970.1M bases, 446.8Mb downloads

UUID: 481642ea-c5b2-4ef3-b636-de70de87f231

Design: Illumina sequencing of Staphylococcus aureus M0126 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216246 • SRP030313 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0126

SAMN02325201 • SRS486896 • All experiments • All runs

Organism: Staphylococcus aureus M0126

Library:

Name: Pond-271567

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 384970.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHIB

material_type: DNA:DNA Somatic

product_order: PDO-1797

product_part_number: P-WG-0004

project: G44536

research_project: RP-433

root_sample_id: SM-4C5BT

sample_id: SM-4RHIB

work_request: 37546

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-16 20:54:12.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.8M spots, 970.1M bases, 446.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001668	2,410,337	486.9M	224.1Mb	2013-09-24
SRR1001669	2,392,287	483.2M	222.7Mb	2013-09-24

ID:: 507536

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