Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364270: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275229' containing sample 'Staphylococcus aureus M0313'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.1M spots, 824.7M bases, 391.9Mb downloads

UUID: 37835b0a-fa99-4e44-9cb7-443bcc0f811a

Design: Illumina sequencing of Staphylococcus aureus M0313 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216376 • SRP031117 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0313

SAMN02325330 • SRS490688 • All experiments • All runs

Organism: Staphylococcus aureus M0313

Library:

Name: Pond-275229

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385911.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJPT

material_type: DNA:DNA Somatic

product_order: PDO-1798

product_part_number: P-WG-0004

project: G44751

research_project: RP-433

root_sample_id: SM-4CULT

sample_id: SM-4RJPT

work_request: 37547

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-04 02:35:40.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 2 runs, 4.1M spots, 824.7M bases, 391.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011683	2,006,050	405.2M	191.5Mb	2013-10-16
SRR1011684	2,076,717	419.5M	200.4Mb	2013-10-16

ID:: 521088

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