Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioSample

SRX364577: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278629' containing sample 'Staphylococcus aureus M1055'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.5M spots, 1.1G bases, 528.3Mb downloads

UUID: b028dd37-d30e-47ab-b238-779d15f62098

Design: Illumina sequencing of Staphylococcus aureus M1055 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA217145 • SRP031422 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1055

SAMN02334669 • SRS490994 • All experiments • All runs

Organism: Staphylococcus aureus M1055

Library:

Name: Pond-278629

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396201.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWMB

material_type: DNA:DNA Somatic

product_order: PDO-1932

product_part_number: P-WG-0004

project: G46208

research_project: RP-433

root_sample_id: SM-4C5G3

sample_id: SM-4UWMB

work_request: 37965

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 03:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.5M spots, 1.1G bases, 528.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1012229	2,750,875	555.7M	264.2Mb	2013-10-16
SRR1012230	2,753,854	556.3M	264.1Mb	2013-10-16

ID:: 521395

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity