Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368146: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279991' containing sample 'Staphylococcus aureus M1435'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.7M spots, 744.5M bases, 324.9Mb downloads

UUID: 2e4bf504-67da-41b3-9f08-e554f2b8db4d

Design: Illumina sequencing of Staphylococcus aureus M1435 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218426 • SRP032130 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1435

SAMN02350605 • SRS494187 • All experiments • All runs

Organism: Staphylococcus aureus M1435

Library:

Name: Pond-279991

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402443.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJPM

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47889

research_project: RP-433

root_sample_id: SM-4CW9M

sample_id: SM-4VJPM

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.7M spots, 744.5M bases, 324.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017415	1,842,110	372.1M	162.1Mb	2013-10-25
SRR1017416	1,843,589	372.4M	162.7Mb	2013-10-25

ID:: 526777

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