Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368028: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281034' containing sample 'Staphylococcus aureus M1263'
1 ILLUMINA (Illumina HiSeq 2000) run: 1.9M spots, 390.3M bases, 178.8Mb downloads

UUID: 3dd12801-b5d0-45fb-a762-ab31475d4850

Design: Illumina sequencing of Staphylococcus aureus M1263 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA220104 • SRP032023 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1263

SAMN02360911 • SRS494074 • All experiments • All runs

Organism: Staphylococcus aureus M1263

Library:

Name: Pond-281034

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407598.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WB1D

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48420

research_project: RP-433

root_sample_id: SM-4CQO5

sample_id: SM-4WB1D

work_request: 38310

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 1.9M spots, 390.3M bases, 178.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017253	1,932,218	390.3M	178.8Mb	2013-10-25

ID:: 526659

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