Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX391596: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-291717' containing sample 'Staphylococcus aureus T45945'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6M spots, 1.2G bases, 628.8Mb downloads

UUID: aa04fa80-69f0-41f0-88c1-e6be330ffdfa

Design: Illumina sequencing of Staphylococcus aureus T45945 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224513 • SRP033971 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus T45945

SAMN02383802 • SRS514830 • All experiments • All runs

Organism: Staphylococcus aureus T45945

Library:

Name: Pond-291717

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 427785.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:52PKJ

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50577

research_project: RP-509

root_sample_id: SM-4RMJ1

sample_id: SM-52PKJ

work_request: 38888

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-29 16:10:35.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6M spots, 1.2G bases, 628.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1049287	2,984,613	602.9M	313.5Mb	2013-12-13
SRR1049288	3,005,666	607.1M	315.3Mb	2013-12-13

ID:: 562350

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