Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX555764: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316156' containing sample 'UB 08-172'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.4M spots, 677.2M bases, 305.7Mb downloads

UUID: b379c904-3e29-4172-9606-7e1da0b150e6

Design: Illumina sequencing of Staphylococcus aureus UB 08-172 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226285 • SRP042493 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus UB 08-172

SAMN02391159 • SRS622848 • All experiments • All runs

Organism: Staphylococcus aureus UB 08-172

Library:

Name: Pond-316156

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 464887.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BIWB

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51863

research_project: RP-513

root_sample_id: SM-4Q858

sample_id: SM-5BIWB

work_request: 39113

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.4M spots, 677.2M bases, 305.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303431	3,352,616	677.2M	305.7Mb	2014-05-30

ID:: 794792

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