Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioSample

SRX467807: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315544' containing sample 'Staphylococcus aureus M17299'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6M spots, 1.2G bases, 630.9Mb downloads

UUID: b16df78b-581a-4ec5-b75d-b821cf2d741d

Design: Illumina sequencing of Staphylococcus aureus M17299 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227693 • SRP037042 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M17299

SAMN02402617 • SRS555393 • All experiments • All runs

Organism: Staphylococcus aureus M17299

Library:

Name: Pond-315544

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462687.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5AST7

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G53942

research_project: RP-509

root_sample_id: SM-4T1J6

sample_id: SM-5AST7

work_request: 39228

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 02:47:49.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6M spots, 1.2G bases, 630.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165382	2,992,878	604.6M	314.4Mb	2014-02-09
SRR1167125	3,028,322	611.7M	316.5Mb	2014-02-11

ID:: 647995

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity