Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX555800: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318357' containing sample 'VET0384R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.4M spots, 694.3M bases, 320.3Mb downloads

UUID: 759a0270-2a8a-4e18-afdf-2b0ed181c2a7

Design: Illumina sequencing of Staphylococcus aureus VET0384R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228714 • SRP042525 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0384R

SAMN02404204 • SRS622883 • All experiments • All runs

Organism: Staphylococcus aureus VET0384R

Library:

Name: Pond-318357

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470086.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8SB

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55144

research_project: RP-513

root_sample_id: SM-4PMV5

sample_id: SM-5C8SB

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.4M spots, 694.3M bases, 320.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303494	1,714,917	346.4M	159.9Mb	2014-05-30
SRR1309449	1,722,266	347.9M	160.4Mb	2014-05-31

ID:: 794828

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