Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX566794: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319778' containing sample 'VET1892R' from individual 'VET0257'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 869.3M bases, 388.3Mb downloads

UUID: b01f7ef2-ae2b-460d-9030-6680dff0adac

Design: Illumina sequencing of Staphylococcus aureus VET1892R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228825 • SRP042740 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1892R

SAMN02404315 • SRS626669 • All experiments • All runs

Organism: Staphylococcus aureus VET1892R

Library:

Name: Pond-319778

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470832.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDHM

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55240

research_project: RP-513

root_sample_id: SM-4PO99

sample_id: SM-5CDHM

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 869.3M bases, 388.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1328185	2,172,196	438.8M	195.7Mb	2014-06-03
SRR1328272	2,131,154	430.5M	192.6Mb	2014-06-03

ID:: 809611

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