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SRX483733: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Schwarzengrund str. AZ_TG71035 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.3M spots, 583.5M bases, 344.3Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FSIS SRCAMB
Study: GenomeTrakr Project: Arizona State Public Health Laboratory
PRJNA183847 • SRP028894 • All experiments • All runs
show Abstracthide Abstract
Currently encompasses whole genome sequencing of cultured pathogens as part of a surveillance project for the rapid detection of outbreaks of foodborne illnesses
Sample:
SAMN02595005 • SRS568048 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Schwarzengrund
Library:
Name: Salmonella enterica str. AZ_TG71035 shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Schwarzengrund str. AZ_TG71035.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.42
Runs: 1 run, 1.3M spots, 583.5M bases, 344.3Mb
Run# of Spots# of BasesSizePublished
SRR11863711,294,028583.5M344.3Mb2014-03-10

ID:
673806

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