Whole genome shotgun sequencing of Listeria monocytogenes subsp. sero... - SRA

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SRX740715: Whole genome shotgun sequencing of Listeria monocytogenes subsp. serovar 4bde str. MOD1_LS651 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 641,663 spots, 299.5M bases, 160.1Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: GenomeTrakr Project: US Food and Drug Administration

PRJNA215355 • SRP028928 • All experiments • All runs

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Listeria monocytogenes Database: isolates from the Food and Drug Administration, Center for Food Safety and Applied Nutrition

Sample:

SAMN02769778 • SRS728419 • All experiments • All runs

Organism: Listeria monocytogenes

Library:

Name: Listeria monocytogenes str. MOD1_LS651 shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Listeria monocytogenes subsp. serovar 4bde str. MOD1_LS651.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 641,663 spots, 299.5M bases, 160.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1623015	641,663	299.5M	160.1Mb	2014-10-24

ID:: 1071591

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