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SRX560366: Whole genome seq of Eschericia coli: bacteremia - upec-133
1 ILLUMINA (Illumina HiSeq 2000) run: 1M spots, 177.8M bases, 128.5Mb downloads

Design: DNA was extracted using Wizard Genomic DNA Purification Kit (Promega). Shotgun sequencing libraries were prepared using the Nextera system (Epicentre BioTechnologies), PCR amplified using FailSafe E PCR mix (Epicentre), monitored by real-time PCR, and removed when exponential growth of product was first observed. Libraries were purified using Agencourt AMPure XP (Beckman Coulter).
Submitted by: University of Washington
Study: Escherichia coli Genome sequencing and assembly
PRJNA248737 • SRP042632 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of extraintestinal pathogenic clinical E. coli strains
Sample:
SAMN02801946 • SRS624660 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: upec-133
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward102  reverse

Runs: 1 run, 1M spots, 177.8M bases, 128.5Mb
Run# of Spots# of BasesSizePublished
SRR13143491,015,713177.8M128.5Mb2014-10-26

ID:
800370

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