U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX560568: Whole genome seq of Eschericia coli: urinary tract - upec-56
1 ILLUMINA (Illumina HiSeq 2000) run: 3.3M spots, 554.8M bases, 420.9Mb downloads

Design: DNA was extracted using Wizard Genomic DNA Purification Kit (Promega). Shotgun sequencing libraries were prepared using the Nextera system (Epicentre BioTechnologies), PCR amplified using FailSafe E PCR mix (Epicentre), monitored by real-time PCR, and removed when exponential growth of product was first observed. Libraries were purified using Agencourt AMPure XP (Beckman Coulter).
Submitted by: University of Washington
Study: Escherichia coli Genome sequencing and assembly
PRJNA248737 • SRP042632 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of extraintestinal pathogenic clinical E. coli strains
Sample:
SAMN02802148 • SRS624864 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: upec-56
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward102  reverse

Runs: 1 run, 3.3M spots, 554.8M bases, 420.9Mb
Run# of Spots# of BasesSizePublished
SRR13145513,252,593554.8M420.9Mb2014-10-26

ID:
800572

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...