U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX15368919: Stenotrophomonas sp. SG1 sequencing
1 ILLUMINA (Illumina NovaSeq 6000) run: 5.4M spots, 1.6G bases, 490.8Mb downloads

Design: Bioneer Genomic DNA extraction kit was used to extract genomic DNA from a culture grown from a single colony after which it was sent for next-generation sequencing to NOVOGENE CORPORATION INC 823 Anchorage Place, Chula Vista, CA 91914, USA.
Submitted by: Indian Institute of Technology Kanpur
Study: Stenotrophomonas sp. SG1 Genome sequencing and assembly
show Abstracthide Abstract
The bacterial strain Stenotrophomonas sp. strain SG1 can transform TNT in both aerobic and anaerobic conditions. The bioinformatic study of assembled genome reveals the presence of genes such as nemA and namA that are involved in TNT metabolism pathways. Also, the genes essential for respiratory nitrate reduction are mapped as well. The bacteria, therefore, possess the tremendous potential to rehabilitate the sites contaminated with TNT.
Sample: Stenotrophomonas sp. strain SG1
SAMN28513040 • SRS13118548 • All experiments • All runs
Library:
Name: SG1_R1_001
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 5.4M spots, 1.6G bases, 490.8Mb
Run# of Spots# of BasesSizePublished
SRR193086485,394,2771.6G490.8Mb2023-06-01

ID:
21907314

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...