U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX16974280: GSM6435511: R21047351-2nd-EGFP-10d-2nd-EGFP-10d [ctr_1]; Schmidtea mediterranea; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 5.1M spots, 1.5G bases, 534.2Mb downloads

External Id: GSM6435511_r1
Submitted by: University of Chinese Academy of Sciences
Study: neuroendocrine control of planarian regeneration
PRJNA867139 • SRP390373 • All experiments • All runs
show Abstracthide Abstract
Effective tissue regeneration requires cells to perceive the surrounding context and make internal state adaptations that enable context-dependent fate changes in time and space, but the mechanisms underlying this complex process remain unclear. Here, transcriptom sequencing was used for study neuroendocrine control of planarian regneration Overall design: Examine gene expression profiles of 10dpf adult planarian after EGFP RNAi(control) and nsf RNAi.
Sample: R21047351-2nd-EGFP-10d-2nd-EGFP-10d [ctr_1]
SAMN30185067 • SRS14561136 • All experiments • All runs
Organism: Schmidtea mediterranea
Library:
Name: GSM6435511
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: For small fragments of different regeneration time points and RNAi-treated planaria, total RNA was purified using TRIzol. For each RNAi treated sample replicates, 2ug RNA was used to generate RNA libraries using VAHTS Universal V8 RNA-seq Library Prep Kit (Vazyme, NR605).
Runs: 1 run, 5.1M spots, 1.5G bases, 534.2Mb
Run# of Spots# of BasesSizePublished
SRR209556945,050,1711.5G534.2Mb2024-12-31

ID:
23751346

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...