B. abortus delta bvrRS strain - SRA

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SRX17923106: B. abortus delta bvrRS strain
1 OXFORD_NANOPORE (MinION) run: 9,904 spots, 81M bases, 67.4Mb downloads

Design: Genomic libraries were prepared with the rapid barcoding sequencing SQK-RBK004 kit (Oxford Nanopore Technologies, UK) for sequencing on a minION platform using the MinKNOW software, followed by base calling and conversion of the raw data to FASTQ format with Guppy v.3.6.0, reads quality assessment with nanoplot 1.40.2, nanofilt 2.8.0 and porechop 0.2.4 to finally get the whole genome assembly with Unicycler v0.4.8

Submitted by: Instituto Tecnologico de Costa Rica

Study: The Brucella abortus double null mutant delta-bvrRS confirmation by long-read genome sequencing

PRJNA891361 • SRP403126 • All experiments • All runs

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The Brucella abortus double null mutant delta-bvrRS was created and confirmation of correct mutagenesis results was done by long-read whole genome sequencing.

Sample: delta-bvrRS

SAMN31324766 • SRS15440974 • All experiments • All runs

Organism: Brucella abortus

Library:

Name: B-abortus-deltabvrRS

Instrument: MinION

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 9,904 spots, 81M bases, 67.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR21939255	9,904	81M	67.4Mb	2024-11-30

ID:: 24862936

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