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SRX18026597: RNA-Seq of Rhizobium leguminosarum pssA mutant
1 ILLUMINA (Illumina NovaSeq 6000) run: 17.6M spots, 5.3G bases, 1.6Gb downloads

Design: library preparation was performed with Illumina Stranded Total RNA Prep with Ribo-Zero Plus (Illumina Inc., San Diego, USA).
Submitted by: UMCS
Study: transciptomic analysis of EPS-deficient pssA mutant of Rhizobium leguminosarum
show Abstracthide Abstract
In order to assess the importance of EPS for the physiology of Rhizobium leguminosarum, a mutant deleted for pssA gene, defective in EPS production, was subjected to RNA-Seq transcriptomic analysis. By means of bioinformatic tools, in the transcriptome of pssA mutant several hundred of differentially expressed genes (DEG) were identified, as compared to the wild type strain. The individual DEGs were classified into the COG categories as well as assigned to the KEGG metabolic pathways.
Sample: pssA mutant
SAMN31455101 • SRS15533854 • All experiments • All runs
Library:
Name: delpssA_1
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 17.6M spots, 5.3G bases, 1.6Gb
Run# of Spots# of BasesSizePublished
SRR2204547617,638,8755.3G1.6Gb2022-10-26

ID:
24982483

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