Whole genome shotgun sequencing of Listeria monocytogenes str. WAPHL_... - SRA

Links from BioSample

SRX878553: Whole genome shotgun sequencing of Listeria monocytogenes str. WAPHL_LIS_A00034 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.1M spots, 505.2M bases, 288.6Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: GenomeTrakr Project: US Food and Drug Administration

PRJNA215355 • SRP028928 • All experiments • All runs

show Abstracthide Abstract

Listeria monocytogenes Database: isolates from the Food and Drug Administration, Center for Food Safety and Applied Nutrition

Sample:

SAMN03339955 • SRS846449 • All experiments • All runs

Organism: Listeria monocytogenes

Library:

Name: Listeria monocytogenes str. WAPHL_LIS_A00034 shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Listeria monocytogenes str. WAPHL_LIS_A00034.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 1.1M spots, 505.2M bases, 288.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1805592	1,105,802	505.2M	288.6Mb	2015-02-17

ID:: 1260275

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity