U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX20165390: Whole-genome sequencing of Clostridioides difficile from rectal swabs and stool samples in an ICU setting
1 ILLUMINA (Illumina MiSeq) run: 1.7M spots, 979.9M bases, 526.9Mb downloads

Design: Illumina library prep using Nextera DNA CD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN34492980 • SRS17489498 • All experiments • All runs
Organism: Clostridioides difficile
Library:
Name: 0000-0094-9923
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.7M spots, 979.9M bases, 526.9Mb
Run# of Spots# of BasesSizePublished
SRR243770191,733,223979.9M526.9Mb2023-05-01

ID:
27582552

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...