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SRX1294236: Whole genome shotgun sequencing of Listeria monocytogenes by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 692,456 spots, 322.2M bases, 188.8Mb downloads

External Id: EXT00138430
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA
Study: GenomeTrakr Project: US Food and Drug Administration
PRJNA215355 • SRP028928 • All experiments • All runs
show Abstracthide Abstract
Listeria monocytogenes Database: isolates from the Food and Drug Administration, Center for Food Safety and Applied Nutrition
Sample:
SAMN03462181 • SRS1093066 • All experiments • All runs
Organism: Listeria monocytogenes
Library:
Name: Listeria monocytogenes Nextera XT shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Listeria monocytogenes.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.8.5
demultiplexer10MiSeq Reporter2.3
Runs: 1 run, 692,456 spots, 322.2M bases, 188.8Mb
Run# of Spots# of BasesSizePublished
SRR2533623692,456322.2M188.8Mb2015-10-01

ID:
1849359

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