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SRX20794013: Genome sequencing of X. campestris pv. campestris strain WHRI 5746
1 ILLUMINA (Illumina NovaSeq 6000) run: 4.2M spots, 1.3G bases, 372.4Mb downloads

Design: Whole-genome shotgun sequencing
Submitted by: University of Exeter
Study: Genome sequencing of Xanthomonas campestris pv. campestris from WHRI collection
show Abstracthide Abstract
The genus Xanthomonas includes bacterial plant pathogens of more than 350 plant species including many crop plants. For example Xanthomonas campestris pv. campestris (Xcc) causes black rot in brassicas such as cabbage, cauliflower, broccoli, Brussels sprouts, kale, oilseed rape, swede, turnip and mustards. This disease is considered the most important disease of vegetable brassicas worldwide and it occurs annualy in UK brassica growing areas including Lincolnshire and Cornwall. As this disease is more problematic in hot and humid weather, the severity of outbreaks could increase with climate change.The WHRI (Warwick Horticulture Research International) is now part of the University of Warwick.
Sample: Genome sequencing of X. campestris pv. campestris strain WHRI 5746
SAMN36001485 • SRS18078895 • All experiments • All runs
Library:
Name: WHRI_5746
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: unspecified
Layout: PAIRED
Runs: 1 run, 4.2M spots, 1.3G bases, 372.4Mb
Run# of Spots# of BasesSizePublished
SRR250395434,203,3531.3G372.4Mb2023-06-27

ID:
28225315

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