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SRX21172358: Whole-genome sequencing of bacteria from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 573,132 spots, 300.4M bases, 199.6Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN36728904 • SRS18433692 • All experiments • All runs
Organism: Citrobacter freundii
Library:
Name: BWH_258_C_fre
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 573,132 spots, 300.4M bases, 199.6Mb
Run# of Spots# of BasesSizePublished
SRR25438658573,132300.4M199.6Mb2023-07-27

ID:
28607692

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