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SRX21172287: Whole-genome sequencing of bacteria from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 1.1M spots, 599.9M bases, 355.5Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN36728990 • SRS18433621 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: BWH_1240_E_col
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.1M spots, 599.9M bases, 355.5Mb
Run# of Spots# of BasesSizePublished
SRR254387291,100,184599.9M355.5Mb2023-07-27

ID:
28607621

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